outcome
Edward eliminates Woodes Rogers, Roberts and Torres and seals the Observatory. He learns that Caroline has died and meets his daughter, Jennifer Scott. In the modern day, John Standish is identified as a Sage.
Assassin's Creed IV: Black Flag
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Every ending, what changes it and what it means.
Black Flag ends with Edward as an Assassin, the Observatory sealed and a reunion with his daughter in London. In the present, an Abstergo employee learns that a Sage is working to resurrect Juno.
What it means
The game is about a man who sought wealth and found a cause and a family. Edward's story is about the cost of freedom and what he leaves to his children.
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Where this comes from
Every sentence above is built from facts confirmed by at least two independent sources. Sources used: Wikipedia, Assassin's Creed Wiki.